DiagnosticTables

Estimated parameters (excluding deviation parameters)
Any parameter with a gradient value with an absolute value above 0.001 or a parameter on bounds is colored in red.
file:
parameterchecks.html

Parameter Value Phase Min Max Init Status Parm_StDev Gradient Pr_type Prior Pr_SD Pr_Like Afterbound
NatM_uniform_Fem_GP_1 0.1567130 2 0.02 0.25 0.12600 OK 0.0093713 2.94427e-05 Log_Norm -2.07 0.31 0.244238 OK
L_at_Amin_Fem_GP_1 13.9895000 3 1.00 25.00 15.03370 OK 0.6259470 -4.74643e-06 No_prior NA NA NA OK
L_at_Amax_Fem_GP_1 52.9485000 2 35.00 70.00 53.89360 OK 0.1885350 -1.94701e-05 No_prior NA NA NA OK
VonBert_K_Fem_GP_1 0.1430840 3 0.10 0.40 0.13556 OK 0.0035438 -1.60106e-05 No_prior NA NA NA OK
CV_young_Fem_GP_1 0.1128060 5 0.03 0.16 0.09890 OK 0.0122604 2.12856e-07 No_prior NA NA NA OK
CV_old_Fem_GP_1 0.0406387 5 0.03 0.16 0.04357 OK 0.0026973 3.87727e-07 No_prior NA NA NA OK
NatM_uniform_Mal_GP_1 -0.1426800 2 -3.00 3.00 -0.13860 OK 0.0126210 6.47063e-05 No_prior NA NA NA OK
L_at_Amax_Mal_GP_1 -0.1403280 2 -1.00 1.00 -0.14900 OK 0.0049610 -4.18673e-05 No_prior NA NA NA OK
VonBert_K_Mal_GP_1 0.3509370 3 -1.00 1.00 0.37790 OK 0.0216936 -1.27701e-05 No_prior NA NA NA OK
CV_old_Mal_GP_1 0.2791100 5 -1.00 1.00 0.16921 OK 0.0692590 -6.24885e-07 No_prior NA NA NA OK
SR_LN(R0) 10.5086000 1 5.00 20.00 12.00000 OK 0.1717470 -0.000123438 No_prior NA NA NA OK
LnQ_base_H&L_survey(4) -16.3882000 2 -30.00 15.00 -1.00000 OK 0.2297140 1.38156e-06 No_prior NA NA NA OK
LnQ_base_Triennial(5) -0.8642500 2 -30.00 15.00 -1.00000 OK 0.1507290 -7.14738e-06 No_prior NA NA NA OK
LnQ_base_WCGBTS(6) -1.1118000 2 -30.00 15.00 -1.00000 OK 0.1727500 -2.07811e-05 No_prior NA NA NA OK
LnQ_base_SMURF(7) -12.7902000 2 -30.00 15.00 -1.00000 OK 0.3058910 7.4726e-08 No_prior NA NA NA OK
Size_DblN_peak_Commercial(1) 47.1262000 1 20.00 55.00 48.64850 OK 0.5366560 7.31154e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_Commercial(1) 4.0149500 3 -5.00 20.00 4.27222 OK 0.0828423 -2.38822e-05 No_prior NA NA NA OK
Size_DblN_ascend_se_At-Sea-Hake(2) 4.3252400 3 -5.00 20.00 4.28460 OK 0.0386079 2.46281e-05 No_prior NA NA NA OK
Size_DblN_peak_Recreational(3) 30.8901000 6 20.00 55.00 30.81100 OK 0.8168000 9.31415e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_Recreational(3) 3.1385900 6 -5.00 20.00 3.17300 OK 0.1763390 -7.1696e-06 No_prior NA NA NA OK
Size_DblN_descend_se_Recreational(3) 7.6755900 4 -5.00 20.00 7.00000 OK 0.9420980 9.81418e-07 No_prior NA NA NA OK
SzSel_Male_Descend_Recreational(3) -2.1760000 6 -10.00 10.00 0.00000 OK 0.4797490 6.36711e-06 No_prior NA NA NA OK
SzSel_Male_Scale_Recreational(3) 0.7095630 6 0.00 2.00 1.00000 OK 0.1127650 9.15748e-07 No_prior NA NA NA OK
Size_DblN_peak_H&L_survey(4) 28.5177000 6 20.00 55.00 30.81100 OK 1.6534900 -5.1936e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_H&L_survey(4) 3.4591800 6 -5.00 20.00 3.17300 OK 0.5086190 1.03318e-05 No_prior NA NA NA OK
Size_DblN_descend_se_H&L_survey(4) 4.7611900 4 -5.00 20.00 7.00000 OK 0.3545270 -2.44434e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_Triennial(5) 5.0869100 3 -5.00 20.00 5.11635 OK 0.1108260 -6.12484e-06 No_prior NA NA NA OK
Size_DblN_peak_WCGBTS(6) 48.1096000 1 20.00 55.00 49.70580 OK 1.8383200 -1.35271e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_WCGBTS(6) 4.3198500 3 -5.00 20.00 4.53247 OK 0.3097310 9.14025e-06 No_prior NA NA NA OK
Size_DblN_peak_At-Sea-Hake(2)_BLK2repl_2015 47.8037000 6 20.00 55.00 48.64850 OK 0.8443820 3.23425e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_At-Sea-Hake(2)_BLK2repl_2015 3.5454200 6 -5.00 20.00 4.24800 OK 0.2045660 -1.09163e-05 No_prior NA NA NA OK
Size_DblN_peak_Recreational(3)_BLK1repl_2004 32.4160000 6 20.00 55.00 31.22000 OK 0.5638590 -2.06672e-06 No_prior NA NA NA OK
Size_DblN_peak_Recreational(3)_BLK1repl_2017 35.0825000 6 20.00 55.00 31.22000 OK 0.7039280 4.98978e-07 No_prior NA NA NA OK
Size_DblN_descend_se_Recreational(3)_BLK1repl_2004 5.7623400 6 -5.00 20.00 4.24800 OK 0.2275610 -6.52886e-06 No_prior NA NA NA OK
Size_DblN_descend_se_Recreational(3)_BLK1repl_2017 9.5143500 6 -5.00 20.00 4.24800 OK 3.7148300 -1.95352e-07 No_prior NA NA NA OK

Highly correlated parameter pairs
Pairs of parameters with the 50 highest correlations, sorted by absolute value of the correlation. Correlations above 0.95 (in absolute value) are colored in red. These parameters may be confounded or may cause convergence issues.
file: correlationcheck.html

label.i label.j corr
SR_LN(R0) NatM_uniform_Fem_GP_1 0.924929
Size_DblN_ascend_se_Commercial(1) Size_DblN_peak_Commercial(1) 0.908545
Size_DblN_ascend_se_WCGBTS(6) Size_DblN_peak_WCGBTS(6) 0.908008
Size_DblN_ascend_se_At-Sea-Hake(2)_BLK2repl_2015 Size_DblN_peak_At-Sea-Hake(2)_BLK2repl_2015 0.905803
Size_DblN_ascend_se_H&L_survey(4) Size_DblN_peak_H&L_survey(4) 0.89167
Size_DblN_peak_Recreational(3)_BLK1repl_2004 Size_DblN_ascend_se_Recreational(3) 0.837687
CV_old_Mal_GP_1 CV_old_Fem_GP_1 -0.812318
Size_DblN_peak_Recreational(3)_BLK1repl_2017 Size_DblN_ascend_se_Recreational(3) 0.764037
VonBert_K_Mal_GP_1 L_at_Amax_Mal_GP_1 -0.754017
Size_DblN_descend_se_H&L_survey(4) Size_DblN_peak_H&L_survey(4) -0.723669
LnQ_base_H&L_survey(4) SR_LN(R0) -0.700234
Size_DblN_ascend_se_Recreational(3) Size_DblN_peak_Recreational(3) 0.689918
CV_young_Fem_GP_1 L_at_Amin_Fem_GP_1 -0.67822
VonBert_K_Fem_GP_1 L_at_Amin_Fem_GP_1 -0.670763
VonBert_K_Fem_GP_1 L_at_Amax_Fem_GP_1 -0.663834
Size_DblN_peak_Recreational(3)_BLK1repl_2017 Size_DblN_peak_Recreational(3)_BLK1repl_2004 0.642551
LnQ_base_SMURF(7) SR_LN(R0) -0.642344
L_at_Amax_Mal_GP_1 L_at_Amax_Fem_GP_1 -0.635398
LnQ_base_WCGBTS(6) SR_LN(R0) -0.614733
Size_DblN_peak_Recreational(3)_BLK1repl_2004 Size_DblN_peak_Recreational(3) 0.577972
Size_DblN_descend_se_H&L_survey(4) Size_DblN_ascend_se_H&L_survey(4) -0.574005
CV_old_Fem_GP_1 CV_young_Fem_GP_1 -0.567937
LnQ_base_H&L_survey(4) NatM_uniform_Fem_GP_1 -0.5573
LnQ_base_SMURF(7) NatM_uniform_Fem_GP_1 -0.547862
Size_DblN_ascend_se_Triennial(5) LnQ_base_Triennial(5) -0.535265
Size_DblN_peak_Recreational(3)_BLK1repl_2017 Size_DblN_peak_Recreational(3) 0.533112
Main_RecrDev_1999 Main_RecrDev_1998 -0.529549
LnQ_base_WCGBTS(6) LnQ_base_H&L_survey(4) 0.529342
Main_RecrDev_2001 Main_RecrDev_2000 -0.521778
Main_RecrDev_2000 Main_RecrDev_1999 -0.521676
Size_DblN_peak_Recreational(3)_BLK1repl_2004 SzSel_Male_Descend_Recreational(3) -0.520404
Main_RecrDev_1986 Main_RecrDev_1985 -0.516682
LnQ_base_SMURF(7) LnQ_base_H&L_survey(4) 0.511888
Main_RecrDev_1985 Main_RecrDev_1984 -0.500912
Main_RecrDev_2004 Main_RecrDev_2003 -0.49977
Main_RecrDev_1998 Main_RecrDev_1997 -0.496361
Main_RecrDev_2005 Main_RecrDev_2004 -0.494454
LnQ_base_Triennial(5) SR_LN(R0) -0.490544
VonBert_K_Mal_GP_1 VonBert_K_Fem_GP_1 -0.49044
Main_RecrDev_1987 Main_RecrDev_1986 -0.487473
Main_RecrDev_1996 Main_RecrDev_1995 -0.472008
Main_RecrDev_2002 Main_RecrDev_2001 -0.466918
Main_RecrDev_1969 Main_RecrDev_1968 -0.466167
Main_RecrDev_1988 Main_RecrDev_1987 -0.464694
VonBert_K_Mal_GP_1 L_at_Amax_Fem_GP_1 0.464061
Main_RecrDev_1962 Early_RecrDev_1961 -0.463324
Main_RecrDev_1984 Main_RecrDev_1983 -0.458258
Main_RecrDev_1997 Main_RecrDev_1996 -0.454403
Main_RecrDev_2003 Main_RecrDev_2002 -0.453033
Main_RecrDev_1983 Main_RecrDev_1982 -0.445278

Parameters with low correlations
Estimated parameters that are the least correlated with all other parameters. The correlation value represents the maximum correlation between the parameter in question and all other estimated parameters. Uncorrelated parameters may not be playing a significant role in the model. Maximum correlations below 0.01 are colored in red.
file: lowcorrelationcheck.html

Parameter max_correlation
Early_RecrDev_1932 0.01746
Early_RecrDev_1933 0.019197
Early_RecrDev_1934 0.0210909
Early_RecrDev_1935 0.0231685
Early_RecrDev_1936 0.0254637
Early_RecrDev_1937 0.0280188
Early_RecrDev_1938 0.030884
Early_RecrDev_1939 0.0341251
Early_RecrDev_1940 0.0378271
Early_RecrDev_1941 0.0420842
Early_RecrDev_1942 0.0469941
Early_RecrDev_1943 0.052611
Early_RecrDev_1944 0.0588262
Early_RecrDev_1945 0.0653607
Early_RecrDev_1946 0.0716687
Early_RecrDev_1947 0.0778685
Late_RecrDev_2020 0.0806434
Early_RecrDev_1954 0.0808395
Early_RecrDev_1948 0.0840293
Early_RecrDev_1953 0.0853986
Early_RecrDev_1949 0.0897715
Early_RecrDev_1952 0.0912943
Early_RecrDev_1950 0.0939494
Early_RecrDev_1951 0.0946129
Early_RecrDev_1955 0.10132
Early_RecrDev_1956 0.109986
Early_RecrDev_1957 0.112957
Early_RecrDev_1958 0.12788
Late_RecrDev_2022 0.141472
Main_RecrDev_2017 0.147793
Main_RecrDev_2018 0.155057
Late_RecrDev_2021 0.163476
Late_RecrDev_2023 0.172013
Late_RecrDev_2019 0.185343
Main_RecrDev_2016 0.193984
Early_RecrDev_1959 0.196161
Late_RecrDev_2024 0.245479
Main_RecrDev_2014 0.248299
Main_RecrDev_2015 0.248299
Main_RecrDev_2013 0.283689
Main_RecrDev_1964 0.286158
Main_RecrDev_2010 0.30351
Main_RecrDev_2011 0.314491
Main_RecrDev_2012 0.314491
Size_DblN_descend_se_Recreational(3)_BLK1repl_2017 0.316806
Main_RecrDev_2009 0.333731
NatM_uniform_Mal_GP_1 0.335016
Main_RecrDev_1965 0.336699
Size_DblN_ascend_se_At-Sea-Hake(2) 0.35117
Early_RecrDev_1960 0.353198