DiagnosticTables

Estimated parameters (excluding deviation parameters)
Any parameter with a gradient value with an absolute value above 0.001 or a parameter on bounds is colored in red.
file:
parameterchecks.html

Parameter Value Phase Min Max Init Status Parm_StDev Gradient Pr_type Prior Pr_SD Pr_Like Afterbound
NatM_uniform_Fem_GP_1 0.2102600 3 0.01 0.5 0.154 OK 0.0156604 8.02759e-05 Log_Norm -1.869 0.31 0.498684 OK
L_at_Amax_Fem_GP_1 54.3987000 2 45.00 60.0 51.000 OK 0.7856310 -1.31453e-05 No_prior NA NA NA OK
VonBert_K_Fem_GP_1 0.1484520 2 0.05 0.3 0.200 OK 0.0058619 -3.19954e-05 No_prior NA NA NA OK
CV_old_Fem_GP_1 0.0834932 3 0.01 0.2 0.100 OK 0.0084054 -9.7194e-07 No_prior NA NA NA OK
NatM_uniform_Mal_GP_1 -0.0507960 3 -0.50 0.5 0.000 OK 0.0312796 1.81209e-05 No_prior NA NA NA OK
L_at_Amax_Mal_GP_1 -0.1458940 2 -0.50 0.5 0.000 OK 0.0152975 -1.49517e-05 No_prior NA NA NA OK
VonBert_K_Mal_GP_1 0.3093660 2 -1.00 1.0 0.000 OK 0.0441302 -1.57782e-05 No_prior NA NA NA OK
CV_old_Mal_GP_1 -0.3290130 3 -2.00 2.0 0.000 OK 0.1386370 -5.50145e-07 No_prior NA NA NA OK
SR_LN(R0) 7.7183000 1 6.00 10.0 8.000 OK 0.1714240 -7.33946e-05 No_prior NA NA NA OK
Q_extraSD_Rec_PR_North(6) 0.0877788 2 0.00 0.4 0.100 OK 0.0273961 -2.50179e-07 No_prior NA NA NA OK
Size_inflection_Comm_nonTwl_dead(1) 35.9117000 2 25.00 45.0 35.000 OK 0.5487140 -1.20037e-06 No_prior NA NA NA OK
Size_95%width_Comm_nonTwl_dead(1) 5.8558800 2 0.00 12.0 5.000 OK 0.5337200 3.9053e-07 No_prior NA NA NA OK
Size_DblN_peak_Comm_nonTwl_live(2) 36.2334000 2 25.00 50.0 37.000 OK 1.4239200 6.1229e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_Comm_nonTwl_live(2) 3.0941600 2 0.50 6.0 3.000 OK 0.4560830 -2.77971e-06 No_prior NA NA NA OK
Size_DblN_descend_se_Comm_nonTwl_live(2) 5.6786500 2 1.00 10.0 5.000 OK 0.9855050 7.37354e-07 No_prior NA NA NA OK
Size_inflection_Comm_Trawl(3) 45.3946000 2 35.00 55.0 40.000 OK 1.1165900 1.12385e-07 No_prior NA NA NA OK
Size_95%width_Comm_Trawl(3) 5.6748400 2 0.10 10.0 5.000 OK 0.8857030 5.321e-07 No_prior NA NA NA OK
Size_DblN_peak_Comm_Discard(4) 27.1041000 2 20.00 35.0 28.000 OK 0.7157090 -1.14653e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_Comm_Discard(4) 3.4221800 2 1.00 6.0 4.000 OK 0.2313600 8.65474e-07 No_prior NA NA NA OK
Size_DblN_descend_se_Comm_Discard(4) 3.9077500 2 1.00 6.0 4.000 OK 0.2322610 -8.00397e-07 No_prior NA NA NA OK
Size_DblN_peak_Rec_PC_North(5) 40.7959000 2 30.00 55.0 37.000 OK 0.7283700 -1.63998e-05 No_prior NA NA NA OK
Size_DblN_ascend_se_Rec_PC_North(5) 4.2097000 2 2.00 6.0 4.000 OK 0.1091120 1.51399e-05 No_prior NA NA NA OK
Size_DblN_descend_se_Rec_PC_North(5) 4.7597100 2 0.10 10.0 4.000 OK 0.4889120 -1.63898e-06 No_prior NA NA NA OK
Size_DblN_end_logit_Rec_PC_North(5) -2.7371600 2 -15.00 15.0 0.000 OK 2.9386800 1.26896e-06 No_prior NA NA NA OK
Size_DblN_peak_Rec_Disc_North(7) 28.3708000 2 15.00 45.0 28.000 OK 2.5293300 -1.17552e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_Rec_Disc_North(7) 4.2038000 2 1.00 7.0 4.000 OK 0.5628150 1.31186e-08 No_prior NA NA NA OK
Size_DblN_descend_se_Rec_Disc_North(7) 4.5105700 2 1.00 8.0 4.000 OK 0.6095670 -7.41436e-08 No_prior NA NA NA OK
Size_DblN_peak_CCFRP(8) 42.1661000 2 30.00 55.0 37.000 OK 1.1035000 -1.91236e-06 No_prior NA NA NA OK
Size_DblN_ascend_se_CCFRP(8) 4.5964400 2 2.00 7.0 4.000 OK 0.1696310 1.71738e-06 No_prior NA NA NA OK
Size_DblN_descend_se_CCFRP(8) 2.8059200 2 0.05 8.0 1.000 OK 0.6920010 -1.14861e-07 No_prior NA NA NA OK
Size_DblN_end_logit_CCFRP(8) -3.1839100 2 -15.00 15.0 -3.000 OK 1.5979200 -1.31658e-06 No_prior NA NA NA OK
Size_DblN_peak_Abrams_Research(11) 39.8553000 2 20.00 60.0 37.000 OK 2.3144600 -4.47379e-07 No_prior NA NA NA OK
Size_DblN_ascend_se_Abrams_Research(11) 4.5296000 2 2.00 7.0 4.000 OK 0.3260930 -1.52385e-06 No_prior NA NA NA OK
Size_DblN_descend_se_Abrams_Research(11) 4.5564000 2 0.10 10.0 4.000 OK 0.8249080 5.417e-07 No_prior NA NA NA OK
Size_DblN_peak_Rec_PC_North(5)_BLK1repl_1875 34.1981000 3 25.00 45.0 37.000 OK 0.9422780 -1.00741e-05 No_prior NA NA NA OK
Size_DblN_ascend_se_Rec_PC_North(5)_BLK1repl_1875 3.8609800 3 1.00 7.0 4.000 OK 0.1967430 1.09102e-05 No_prior NA NA NA OK

Highly correlated parameter pairs
Pairs of parameters with the 50 highest correlations, sorted by absolute value of the correlation. Correlations above 0.95 (in absolute value) are colored in red. These parameters may be confounded or may cause convergence issues.
file: correlationcheck.html

label.i label.j corr
VonBert_K_Fem_GP_1 L_at_Amax_Fem_GP_1 -0.92988
SR_LN(R0) NatM_uniform_Fem_GP_1 0.922477
Size_DblN_ascend_se_Comm_nonTwl_live(2) Size_DblN_peak_Comm_nonTwl_live(2) 0.910691
Size_DblN_ascend_se_Rec_PC_North(5)_BLK1repl_1875 Size_DblN_peak_Rec_PC_North(5)_BLK1repl_1875 0.906634
Size_DblN_ascend_se_Abrams_Research(11) Size_DblN_peak_Abrams_Research(11) 0.905037
Size_DblN_ascend_se_Rec_PC_North(5) Size_DblN_peak_Rec_PC_North(5) 0.903078
VonBert_K_Mal_GP_1 L_at_Amax_Mal_GP_1 -0.900411
L_at_Amax_Mal_GP_1 L_at_Amax_Fem_GP_1 -0.867383
Size_DblN_descend_se_CCFRP(8) Size_DblN_peak_CCFRP(8) -0.823274
VonBert_K_Mal_GP_1 VonBert_K_Fem_GP_1 -0.818105
L_at_Amax_Mal_GP_1 VonBert_K_Fem_GP_1 0.814795
Size_DblN_end_logit_Rec_PC_North(5) Size_DblN_descend_se_Rec_PC_North(5) -0.797693
Size_DblN_ascend_se_Rec_Disc_North(7) Size_DblN_peak_Rec_Disc_North(7) 0.794382
Size_DblN_ascend_se_CCFRP(8) Size_DblN_peak_CCFRP(8) 0.787527
Size_DblN_ascend_se_Comm_Discard(4) Size_DblN_peak_Comm_Discard(4) 0.77986
VonBert_K_Mal_GP_1 L_at_Amax_Fem_GP_1 0.758273
Size_95%width_Comm_Trawl(3) Size_inflection_Comm_Trawl(3) 0.756373
Size_DblN_descend_se_Abrams_Research(11) Size_DblN_peak_Abrams_Research(11) -0.726591
Size_95%width_Comm_nonTwl_dead(1) Size_inflection_Comm_nonTwl_dead(1) 0.726338
CV_old_Mal_GP_1 CV_old_Fem_GP_1 -0.723803
Size_DblN_descend_se_Comm_Discard(4) Size_DblN_peak_Comm_Discard(4) -0.693408
Size_DblN_descend_se_Rec_Disc_North(7) Size_DblN_peak_Rec_Disc_North(7) -0.685491
Size_DblN_descend_se_CCFRP(8) Size_DblN_ascend_se_CCFRP(8) -0.618887
Size_DblN_descend_se_Abrams_Research(11) Size_DblN_ascend_se_Abrams_Research(11) -0.617342
Main_RecrDev_2001 Main_RecrDev_2000 -0.562332
Main_RecrDev_2002 Main_RecrDev_2001 -0.543596
Main_RecrDev_2000 Main_RecrDev_1999 -0.535235
Size_DblN_end_logit_CCFRP(8) Size_DblN_descend_se_CCFRP(8) -0.514956
Size_DblN_descend_se_Comm_nonTwl_live(2) Size_DblN_peak_Comm_nonTwl_live(2) -0.48782
Main_RecrDev_1995 Main_RecrDev_1994 -0.48304
Main_RecrDev_1989 Main_RecrDev_1988 -0.476528
Main_RecrDev_1973 Main_RecrDev_1972 -0.467419
Size_DblN_descend_se_Comm_Discard(4) Size_DblN_ascend_se_Comm_Discard(4) -0.458942
Size_DblN_descend_se_Rec_Disc_North(7) Size_DblN_ascend_se_Rec_Disc_North(7) -0.456395
Main_RecrDev_2012 Main_RecrDev_2011 -0.447629
Main_RecrDev_1970 Main_RecrDev_1969 -0.44603
Main_RecrDev_2003 Main_RecrDev_2002 -0.443338
Main_RecrDev_1996 Main_RecrDev_1995 -0.441957
Size_DblN_descend_se_Rec_PC_North(5) Size_DblN_peak_Rec_PC_North(5) -0.440837
Main_RecrDev_2011 Main_RecrDev_2010 -0.4403
Main_RecrDev_1975 Main_RecrDev_1974 -0.42994
Main_RecrDev_1969 Main_RecrDev_1968 -0.422891
Main_RecrDev_2010 Main_RecrDev_2009 -0.420886
Main_RecrDev_1986 Main_RecrDev_1985 -0.419053
Main_RecrDev_2013 Main_RecrDev_2012 -0.418283
Size_DblN_descend_se_Rec_PC_North(5) Size_DblN_ascend_se_Rec_PC_North(5) -0.417762
Main_RecrDev_1991 Main_RecrDev_1990 -0.40863
Main_RecrDev_1994 Main_RecrDev_1993 -0.406641
Main_RecrDev_1990 Main_RecrDev_1989 -0.403481
Main_RecrDev_1993 Main_RecrDev_1992 -0.394394

Parameters with low correlations
Estimated parameters that are the least correlated with all other parameters. The correlation value represents the maximum correlation between the parameter in question and all other estimated parameters. Uncorrelated parameters may not be playing a significant role in the model. Maximum correlations below 0.01 are colored in red.
file: lowcorrelationcheck.html

Parameter max_correlation
Main_RecrDev_2022 0.117988
Main_RecrDev_2021 0.1196
Main_RecrDev_2020 0.120543
Main_RecrDev_1966 0.125242
Main_RecrDev_1965 0.125954
Main_RecrDev_2006 0.135658
Main_RecrDev_2018 0.137964
Main_RecrDev_2019 0.146311
Main_RecrDev_1967 0.146731
Q_extraSD_Rec_PR_North(6) 0.167772
NatM_uniform_Mal_GP_1 0.171451
Main_RecrDev_2007 0.181421
Main_RecrDev_2017 0.183676
Main_RecrDev_1978 0.198957
Main_RecrDev_1982 0.199089
Main_RecrDev_2005 0.20915
Main_RecrDev_1964 0.227032
Main_RecrDev_1979 0.245685
Main_RecrDev_1983 0.24829
Main_RecrDev_1963 0.250634
Main_RecrDev_1971 0.251688
Main_RecrDev_1977 0.266807
Main_RecrDev_2016 0.268708
Main_RecrDev_1997 0.270406
Main_RecrDev_1980 0.29133
Main_RecrDev_1981 0.29133
Main_RecrDev_2008 0.304652
Main_RecrDev_2004 0.306992
Main_RecrDev_1987 0.32495
Main_RecrDev_1976 0.338949
Main_RecrDev_2015 0.344902
Main_RecrDev_2014 0.360631
Main_RecrDev_1984 0.36892
Main_RecrDev_1998 0.37234
Main_RecrDev_1992 0.394394
Main_RecrDev_1993 0.406641
Main_RecrDev_1990 0.40863
Main_RecrDev_1991 0.40863
Main_RecrDev_2013 0.418283
Main_RecrDev_1985 0.419053
Main_RecrDev_1986 0.419053
Main_RecrDev_2009 0.420886
Main_RecrDev_1968 0.422891
Main_RecrDev_1974 0.42994
Main_RecrDev_1975 0.42994
Main_RecrDev_2010 0.4403
Main_RecrDev_1996 0.441957
Main_RecrDev_2003 0.443338
Main_RecrDev_1969 0.44603
Main_RecrDev_1970 0.44603