DiagnosticTables

Estimated parameters (excluding deviation parameters)
Any parameter with a gradient value with an absolute value above 0.001 or a parameter on bounds is colored in red.
file:
parameterchecks.html

Parameter Value Phase Min Max Init Status Parm_StDev Gradient Pr_type Prior Pr_SD Pr_Like Afterbound
L_at_Amax_Fem_GP_1 50.8462000 3 1e+00 500 50.8498000 OK 0.2793480 9.83598e-05 Normal 48.82 0.3 22.8072 OK
VonBert_K_Fem_GP_1 0.1836630 3 1e-03 2 0.1836340 OK 0.0020233 -1.94992e-05 No_prior NA NA NA OK
L_at_Amax_Mal_GP_1 46.6150000 3 1e+00 500 46.6172000 OK 0.4157100 0.000626323 No_prior NA NA NA OK
VonBert_K_Mal_GP_1 0.2094330 3 1e-03 2 0.2094060 OK 0.0039059 0.000189693 No_prior NA NA NA OK
SR_LN(R0) 8.1349100 1 1e-04 15 8.1352600 OK 0.0396676 0.000146349 No_prior NA NA NA OK
Q_extraSD_Non-Trawl_wdis(2) 0.0315113 3 0e+00 5 0.0315015 LO 0.0172374 2.809e-05 No_prior NA NA NA OK
Q_extraSD_Ocean(3) 0.2106710 3 0e+00 5 0.2107320 OK 0.0436370 -5.50346e-06 No_prior NA NA NA OK
Q_extraSD_MPA(5) 0.1471670 3 0e+00 5 0.1472220 OK 0.0798273 -1.89014e-06 No_prior NA NA NA OK
Q_extraSD_Tag(7) 0.0962410 3 0e+00 5 0.0962478 OK 0.0329486 1.42102e-06 No_prior NA NA NA OK
Q_extraSD_MRFSS(8) 0.3194670 3 0e+00 5 0.3195390 OK 0.0812908 5.05093e-06 No_prior NA NA NA OK

Highly correlated parameter pairs
Pairs of parameters with the 50 highest correlations, sorted by absolute value of the correlation. Correlations above 0.95 (in absolute value) are colored in red. These parameters may be confounded or may cause convergence issues.
file: correlationcheck.html

label.i label.j corr
VonBert_K_Mal_GP_1 L_at_Amax_Mal_GP_1 -0.951895
VonBert_K_Fem_GP_1 L_at_Amax_Fem_GP_1 -0.900244
Main_RecrDev_2002 Main_RecrDev_2001 -0.617407
Main_RecrDev_2001 Main_RecrDev_2000 -0.574744
Main_RecrDev_2003 Main_RecrDev_2002 -0.567157
Main_RecrDev_2007 Main_RecrDev_2006 -0.537392
Main_RecrDev_2004 Main_RecrDev_2003 -0.488009
Main_RecrDev_2000 Main_RecrDev_1999 -0.478579
Main_RecrDev_2009 Main_RecrDev_2008 -0.457986
Main_RecrDev_2006 Main_RecrDev_2005 -0.447907
Main_RecrDev_2008 Main_RecrDev_2007 -0.438407
Main_RecrDev_2005 Main_RecrDev_2004 -0.408688
Main_RecrDev_2010 Main_RecrDev_2009 -0.390121
Main_RecrDev_1999 Main_RecrDev_1998 -0.36063
Main_RecrDev_1994 Main_RecrDev_1993 0.335121
SR_LN(R0) L_at_Amax_Mal_GP_1 0.331027
Main_RecrDev_1995 Main_RecrDev_1994 0.305748
Main_RecrDev_1994 Main_RecrDev_1992 0.291976
SR_LN(R0) L_at_Amax_Fem_GP_1 0.283658
Main_RecrDev_1993 Main_RecrDev_1992 0.278648
Main_RecrDev_2001 Main_RecrDev_1999 0.275172
Q_extraSD_Ocean(3) Q_extraSD_Non-Trawl_wdis(2) -0.265812
Main_RecrDev_1998 Main_RecrDev_1997 -0.262395
Main_RecrDev_1994 Main_RecrDev_1991 0.254249
Main_RecrDev_1995 Main_RecrDev_1993 0.252342
SR_LN(R0) VonBert_K_Mal_GP_1 -0.252208
Main_RecrDev_1993 Main_RecrDev_1991 0.24541
Q_extraSD_Non-Trawl_wdis(2) Main_RecrDev_2016 -0.238833
L_at_Amax_Mal_GP_1 L_at_Amax_Fem_GP_1 0.235982
Main_RecrDev_2003 Main_RecrDev_2001 0.23567
Q_extraSD_Non-Trawl_wdis(2) SR_LN(R0) -0.23347
Main_RecrDev_2002 Main_RecrDev_2000 0.231726
Q_extraSD_Non-Trawl_wdis(2) Main_RecrDev_2014 -0.230365
Main_RecrDev_2011 Main_RecrDev_2010 -0.225014
Main_RecrDev_2016 Main_RecrDev_2014 0.219139
Main_RecrDev_2010 Main_RecrDev_2008 0.218058
Main_RecrDev_1992 Main_RecrDev_1991 0.214468
Main_RecrDev_1985 SR_LN(R0) -0.213429
Main_RecrDev_1995 Main_RecrDev_1992 0.213106
Main_RecrDev_1989 SR_LN(R0) -0.20151
Main_RecrDev_2012 Main_RecrDev_2011 -0.200398
Main_RecrDev_1994 Main_RecrDev_1990 0.19761
Main_RecrDev_2017 SR_LN(R0) 0.193135
Main_RecrDev_1995 Main_RecrDev_1991 0.190566
Q_extraSD_Non-Trawl_wdis(2) Main_RecrDev_2013 -0.190441
Q_extraSD_Ocean(3) SR_LN(R0) 0.187421
Main_RecrDev_2004 SR_LN(R0) 0.187397
Main_RecrDev_1993 Main_RecrDev_1990 0.18561
Main_RecrDev_1994 Main_RecrDev_1989 0.185561
Q_extraSD_Non-Trawl_wdis(2) Main_RecrDev_2008 -0.18185

Parameters with low correlations
Estimated parameters that are the least correlated with all other parameters. The correlation value represents the maximum correlation between the parameter in question and all other estimated parameters. Uncorrelated parameters may not be playing a significant role in the model. Maximum correlations below 0.01 are colored in red.
file: lowcorrelationcheck.html

Parameter max_correlation
Q_extraSD_MPA(5) 0.0612657
Q_extraSD_MRFSS(8) 0.113061
Main_RecrDev_1981 0.130777
Main_RecrDev_1980 0.131087
Q_extraSD_Tag(7) 0.134812
Main_RecrDev_1982 0.138132
Main_RecrDev_1983 0.143195
Main_RecrDev_1984 0.145146
Main_RecrDev_1996 0.154235
Main_RecrDev_1987 0.16358
Main_RecrDev_1988 0.170134
Main_RecrDev_2015 0.171392
Main_RecrDev_1986 0.175783
Main_RecrDev_2013 0.190441
Main_RecrDev_2017 0.193135
Main_RecrDev_1990 0.19761
Main_RecrDev_2012 0.200398
Main_RecrDev_1989 0.20151
Main_RecrDev_1985 0.213429
Main_RecrDev_2011 0.225014
Main_RecrDev_2014 0.230365
Main_RecrDev_2016 0.238833
Main_RecrDev_1991 0.254249
Main_RecrDev_1997 0.262395
Q_extraSD_Non-Trawl_wdis(2) 0.265812
Q_extraSD_Ocean(3) 0.265812
Main_RecrDev_1992 0.291976
Main_RecrDev_1995 0.305748
SR_LN(R0) 0.331027
Main_RecrDev_1993 0.335121
Main_RecrDev_1994 0.335121
Main_RecrDev_1998 0.36063
Main_RecrDev_2010 0.390121
Main_RecrDev_2005 0.447907
Main_RecrDev_2008 0.457986
Main_RecrDev_2009 0.457986
Main_RecrDev_1999 0.478579
Main_RecrDev_2004 0.488009
Main_RecrDev_2006 0.537392
Main_RecrDev_2007 0.537392
Main_RecrDev_2003 0.567157
Main_RecrDev_2000 0.574744
Main_RecrDev_2001 0.617407
Main_RecrDev_2002 0.617407
L_at_Amax_Fem_GP_1 0.900244
VonBert_K_Fem_GP_1 0.900244
L_at_Amax_Mal_GP_1 0.951895
VonBert_K_Mal_GP_1 0.951895