SS Output

AgeComp

Age comps, aggregated across time by fleet.
Labels 'retained' and 'discard' indicate discarded or retained sampled for each fleet. Panels without this designation represent the whole catch.
file: comp_agefit__aggregated_across_time.png

Pearson residuals, comparing across fleets
Closed bubbles are positive residuals (observed > expected) and open bubbles are negative residuals (observed < expected).
file: comp_agefit__multi-fleet_comparison.png

Age comps, whole catch, BottomTrawl (plot 1 of 2).

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_agefit_flt1mkt0_page1.png

Pearson residuals, whole catch, BottomTrawl (max=7.37) (plot 2 of 2)
Closed bubbles are positive residuals (observed > expected) and open bubbles are negative residuals (observed < expected).
file: comp_agefit_residsflt1mkt0_page2.png

N-EffN comparison, Age comps, whole catch, BottomTrawl
file: comp_agefit_sampsize_flt1mkt0.png

Mean age for BottomTrawl with 95% confidence intervals based on current sample sizes.
Francis data weighting method TA1.8: thinner intervals (with capped ends) show result of further adjusting sample sizes based on suggested multiplier (with 95% interval) for age data from BottomTrawl:
1.0012 (0.7425-1.5985)
For more info, see Francis (2011).
file: comp_agefit_data_weighting_TA1-8_BottomTrawl.png

Age comps, whole catch, MidwaterTrawl (plot 1 of 2).

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_agefit_flt2mkt0_page1.png

Pearson residuals, whole catch, MidwaterTrawl (max=3.78) (plot 2 of 2)
Closed bubbles are positive residuals (observed > expected) and open bubbles are negative residuals (observed < expected).
file: comp_agefit_residsflt2mkt0_page2.png

N-EffN comparison, Age comps, whole catch, MidwaterTrawl
file: comp_agefit_sampsize_flt2mkt0.png

Mean age for MidwaterTrawl with 95% confidence intervals based on current sample sizes.
Francis data weighting method TA1.8: thinner intervals (with capped ends) show result of further adjusting sample sizes based on suggested multiplier (with 95% interval) for age data from MidwaterTrawl:
0.999 (0.7743-1.3823)
For more info, see Francis (2011).
file: comp_agefit_data_weighting_TA1-8_MidwaterTrawl.png

Age comps, whole catch, Hake (plot 1 of 2).

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_agefit_flt3mkt0_page1.png

Pearson residuals, whole catch, Hake (max=4.61) (plot 2 of 2)
Closed bubbles are positive residuals (observed > expected) and open bubbles are negative residuals (observed < expected).
file: comp_agefit_residsflt3mkt0_page2.png

N-EffN comparison, Age comps, whole catch, Hake
file: comp_agefit_sampsize_flt3mkt0.png

Mean age for Hake with 95% confidence intervals based on current sample sizes.
Francis data weighting method TA1.8: thinner intervals (with capped ends) show result of further adjusting sample sizes based on suggested multiplier (with 95% interval) for age data from Hake:
1.0004 (0.6955-1.9041)
For more info, see Francis (2011).
file: comp_agefit_data_weighting_TA1-8_Hake.png

Excluded age comps, whole catch, WCGBTS.

'N adj.' is the input sample size after data-weighting adjustment. N eff. is the calculated effective sample size used in the McAllister-Ianelli tuning method.
file: comp_gstagefit_flt8mkt0.png

Pearson residuals, whole catch, WCGBTS (max=NA)
Closed bubbles are positive residuals (observed > expected) and open bubbles are negative residuals (observed < expected).
file: comp_gstagefit_residsflt8mkt0.png

Sex ratios for age comps, whole catch, BottomTrawl (plot 1 of 2).
Observed sex ratios (points) with 75% intervals (vertical lines) calculated as a Jeffreys interval based on the adjusted input sample size. The model expectation is shown in the purple line.
file: sexratio_age_flt1mkt0_page1.png

Sex ratios for age comps, whole catch, MidwaterTrawl (plot 1 of 2).
Observed sex ratios (points) with 75% intervals (vertical lines) calculated as a Jeffreys interval based on the adjusted input sample size. The model expectation is shown in the purple line.
file: sexratio_age_flt2mkt0_page1.png

Sex ratios for age comps, whole catch, Hake (plot 1 of 2).
Observed sex ratios (points) with 75% intervals (vertical lines) calculated as a Jeffreys interval based on the adjusted input sample size. The model expectation is shown in the purple line.
file: sexratio_age_flt3mkt0_page1.png